flowr: streamlining computing workflows

try this

install.packages(devtools)
devtools::install_github("sahilseth/flowr")
## OR
install.packages("flowr") 
library(flowr) ## load the library
setup() ## copy flowr bash script
run('sleep', execute=TRUE,  platform='moab')
## OR from terminal
# flowr run sleep execute=TRUE platform=moab

pic of flood

a deluge of data

`flowr`

streamlining computing workflows

What we need?

A system, where one could simply specify how to run a set of jobs
Specify the sequence to follow
Optionally specify resources [CPU/Memory required etc]

What we dont need?

effiency is good, but not at the cost of us spending too much time, on re-inventing the wheel
(dont) learn a new language design flows
(dont) rewrite existing pipelines from scratch

a flowr recepie needs:

two ingredients
- table with shell commands to run [flow_mat]
- another table specifying the structure [flow_def]
knowledge of 5 terms
- scatter, sequential (serial)
- gather, serial, burst